Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.34■□□□□ 0.53
Per1O35973 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Per1O35973 Gm45328-201ENSMUST00000210942 917 ntBASIC18.34■□□□□ 0.53
Per1O35973 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Per1O35973 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Per1O35973 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.33■□□□□ 0.53
Per1O35973 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.33■□□□□ 0.53
Per1O35973 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Per1O35973 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.33■□□□□ 0.53
Per1O35973 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Per1O35973 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Per1O35973 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Per1O35973 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Per1O35973 Gm27704-201ENSMUST00000185094 107 ntBASIC18.33■□□□□ 0.52
Per1O35973 Gm21362-201ENSMUST00000194272 928 ntBASIC18.33■□□□□ 0.52
Per1O35973 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per1O35973 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per1O35973 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per1O35973 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Per1O35973 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per1O35973 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per1O35973 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per1O35973 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per1O35973 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per1O35973 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.33■□□□□ 0.52
Per1O35973 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Per1O35973 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per1O35973 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Per1O35973 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per1O35973 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per1O35973 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per1O35973 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per1O35973 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Per1O35973 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.32■□□□□ 0.52
Per1O35973 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per1O35973 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per1O35973 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per1O35973 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Per1O35973 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Per1O35973 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per1O35973 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per1O35973 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Per1O35973 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per1O35973 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per1O35973 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.31■□□□□ 0.52
Per1O35973 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per1O35973 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.31■□□□□ 0.52
Per1O35973 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.31■□□□□ 0.52
Per1O35973 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per1O35973 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per1O35973 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Per1O35973 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per1O35973 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Per1O35973 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Per1O35973 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Per1O35973 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Per1O35973 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.3■□□□□ 0.52
Per1O35973 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Per1O35973 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.3■□□□□ 0.52
Per1O35973 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Per1O35973 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.3■□□□□ 0.52
Per1O35973 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.3■□□□□ 0.52
Per1O35973 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Per1O35973 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Per1O35973 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.29■□□□□ 0.52
Per1O35973 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per1O35973 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per1O35973 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Per1O35973 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per1O35973 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per1O35973 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.29■□□□□ 0.52
Per1O35973 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per1O35973 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per1O35973 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Per1O35973 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms