Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Efnb3O35393 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.39□□□□□ -0.27
Efnb3O35393 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.39□□□□□ -0.27
Efnb3O35393 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Efnb3O35393 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Efnb3O35393 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.39□□□□□ -0.27
Efnb3O35393 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.39□□□□□ -0.27
Efnb3O35393 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Efnb3O35393 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.39□□□□□ -0.27
Efnb3O35393 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Efnb3O35393 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Efnb3O35393 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
Efnb3O35393 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Efnb3O35393 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.38□□□□□ -0.27
Efnb3O35393 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.38□□□□□ -0.27
Efnb3O35393 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Efnb3O35393 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.38□□□□□ -0.27
Efnb3O35393 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Efnb3O35393 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.38□□□□□ -0.27
Efnb3O35393 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Efnb3O35393 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Efnb3O35393 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Efnb3O35393 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.37□□□□□ -0.27
Efnb3O35393 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Efnb3O35393 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Efnb3O35393 Gm44549-201ENSMUST00000208351 577 ntBASIC13.37□□□□□ -0.27
Efnb3O35393 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Efnb3O35393 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.37□□□□□ -0.27
Efnb3O35393 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Efnb3O35393 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.36□□□□□ -0.27
Efnb3O35393 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.36□□□□□ -0.27
Efnb3O35393 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Efnb3O35393 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Efnb3O35393 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Efnb3O35393 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Efnb3O35393 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Efnb3O35393 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms