Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.09■□□□□ 0.01
Alx4O35137 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Alx4O35137 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Alx4O35137 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Alx4O35137 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.09■□□□□ 0.01
Alx4O35137 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.09■□□□□ 0.01
Alx4O35137 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.09■□□□□ 0.01
Alx4O35137 Gm18025-201ENSMUST00000221733 862 ntBASIC15.09■□□□□ 0.01
Alx4O35137 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.09■□□□□ 0.01
Alx4O35137 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Alx4O35137 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Alx4O35137 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Alx4O35137 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.08■□□□□ 0.01
Alx4O35137 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Alx4O35137 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Alx4O35137 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Alx4O35137 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Gm11249-201ENSMUST00000117071 859 ntBASIC15.08■□□□□ 0
Alx4O35137 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.08■□□□□ 0
Alx4O35137 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Alx4O35137 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Alx4O35137 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Alx4O35137 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Alx4O35137 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Alx4O35137 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Alx4O35137 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Alx4O35137 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Gm12933-201ENSMUST00000120203 872 ntBASIC15.07■□□□□ 0
Alx4O35137 Gm13158-201ENSMUST00000122007 736 ntBASIC15.07■□□□□ 0
Alx4O35137 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.07■□□□□ 0
Alx4O35137 Gm24841-201ENSMUST00000158676 357 ntBASIC15.07■□□□□ 0
Alx4O35137 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Alx4O35137 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.07■□□□□ 0
Alx4O35137 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx4O35137 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Alx4O35137 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.06■□□□□ 0
Alx4O35137 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Alx4O35137 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Alx4O35137 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.06■□□□□ 0
Alx4O35137 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.06■□□□□ 0
Alx4O35137 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Alx4O35137 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.06■□□□□ 0
Alx4O35137 Gm8495-201ENSMUST00000188740 694 ntBASIC15.06■□□□□ 0
Alx4O35137 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alx4O35137 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Alx4O35137 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms