Protein–RNA interactions for Protein: O08750

Nfil3, Nuclear factor interleukin-3-regulated protein, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfil3O08750 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nfil3O08750 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nfil3O08750 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Nfil3O08750 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nfil3O08750 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nfil3O08750 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nfil3O08750 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nfil3O08750 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nfil3O08750 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nfil3O08750 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nfil3O08750 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nfil3O08750 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nfil3O08750 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nfil3O08750 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.42■□□□□ 0.7
Nfil3O08750 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nfil3O08750 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfil3O08750 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Nfil3O08750 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfil3O08750 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Nfil3O08750 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfil3O08750 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfil3O08750 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nfil3O08750 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.41■□□□□ 0.7
Nfil3O08750 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Nfil3O08750 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.41■□□□□ 0.7
Nfil3O08750 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfil3O08750 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.41■□□□□ 0.7
Nfil3O08750 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nfil3O08750 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nfil3O08750 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nfil3O08750 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.4■□□□□ 0.7
Nfil3O08750 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Nfil3O08750 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nfil3O08750 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nfil3O08750 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nfil3O08750 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nfil3O08750 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nfil3O08750 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nfil3O08750 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nfil3O08750 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nfil3O08750 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nfil3O08750 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Nfil3O08750 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Nfil3O08750 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nfil3O08750 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Nfil3O08750 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.39■□□□□ 0.69
Nfil3O08750 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.39■□□□□ 0.69
Nfil3O08750 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nfil3O08750 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.39■□□□□ 0.69
Nfil3O08750 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfil3O08750 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nfil3O08750 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.38■□□□□ 0.69
Nfil3O08750 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfil3O08750 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nfil3O08750 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.37■□□□□ 0.69
Nfil3O08750 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.37■□□□□ 0.69
Nfil3O08750 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfil3O08750 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nfil3O08750 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nfil3O08750 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms