Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Gm20760-201ENSMUST00000179197 648 ntBASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf11bO08712 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf11bO08712 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Gm7638-201ENSMUST00000121348 967 ntBASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Gm27000-201ENSMUST00000182943 842 ntBASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Gm38027-201ENSMUST00000192315 235 ntBASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf11bO08712 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Tnfrsf11bO08712 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Tnfrsf11bO08712 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tnfrsf11bO08712 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tnfrsf11bO08712 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms