Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav13d-3J3QMG8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Gm30025-201ENSMUST00000218555 728 ntBASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-3J3QMG8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-3J3QMG8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-3J3QMG8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-3J3QMG8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-3J3QMG8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-3J3QMG8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav13d-3J3QMG8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-3J3QMG8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Trav13d-3J3QMG8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav13d-3J3QMG8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-3J3QMG8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-3J3QMG8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13d-3J3QMG8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.83□□□□□ -0.03
Trav13d-3J3QMG8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.83□□□□□ -0.03
Trav13d-3J3QMG8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13d-3J3QMG8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms