Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3727J3QM54 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3727J3QM54 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3727J3QM54 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3727J3QM54 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3727J3QM54 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3727J3QM54 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm3727J3QM54 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.44□□□□□ -0.1
Gm3727J3QM54 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm3727J3QM54 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.43□□□□□ -0.1
Gm3727J3QM54 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm3727J3QM54 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3727J3QM54 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Gm3727J3QM54 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.42□□□□□ -0.1
Gm3727J3QM54 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.42□□□□□ -0.1
Gm3727J3QM54 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3727J3QM54 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.41□□□□□ -0.1
Gm3727J3QM54 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Gm3727J3QM54 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3727J3QM54 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms