Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.62■□□□□ 0.25
Srp54bE9PXC0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Gm13186-201ENSMUST00000118031 316 ntBASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srp54bE9PXC0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Gm27357-201ENSMUST00000183754 135 ntBASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp54bE9PXC0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54bE9PXC0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54bE9PXC0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54bE9PXC0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54bE9PXC0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54bE9PXC0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Srp54bE9PXC0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54bE9PXC0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54bE9PXC0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54bE9PXC0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54bE9PXC0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Srp54bE9PXC0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms