Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col6a5A6H584 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col6a5A6H584 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col6a5A6H584 Golph3-202ENSMUST00000226517 2359 ntBASIC12.75□□□□□ -0.37
Col6a5A6H584 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Col6a5A6H584 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Gm44335-201ENSMUST00000196879 141 ntBASIC12.75□□□□□ -0.37
Col6a5A6H584 Gm44297-201ENSMUST00000198304 141 ntBASIC12.75□□□□□ -0.37
Col6a5A6H584 Gm44346-201ENSMUST00000198851 141 ntBASIC12.75□□□□□ -0.37
Col6a5A6H584 Gm2423-201ENSMUST00000074863 733 ntBASIC12.75□□□□□ -0.37
Col6a5A6H584 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Col6a5A6H584 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col6a5A6H584 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Gm12497-201ENSMUST00000138778 237 ntBASIC12.75□□□□□ -0.37
Col6a5A6H584 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.75□□□□□ -0.37
Col6a5A6H584 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.75□□□□□ -0.37
Col6a5A6H584 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a5A6H584 Notumos-201ENSMUST00000151998 2659 ntBASIC12.74□□□□□ -0.37
Col6a5A6H584 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.74□□□□□ -0.37
Col6a5A6H584 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Col6a5A6H584 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col6a5A6H584 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col6a5A6H584 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Col6a5A6H584 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.74□□□□□ -0.37
Col6a5A6H584 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.74□□□□□ -0.37
Col6a5A6H584 Gm7506-201ENSMUST00000207758 815 ntBASIC12.74□□□□□ -0.37
Col6a5A6H584 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Col6a5A6H584 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Gm18421-201ENSMUST00000204122 625 ntBASIC12.74□□□□□ -0.37
Col6a5A6H584 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.74□□□□□ -0.37
Col6a5A6H584 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a5A6H584 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Hsf1-207ENSMUST00000228371 2102 ntBASIC12.73□□□□□ -0.37
Col6a5A6H584 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Gm13823-201ENSMUST00000119930 345 ntBASIC12.73□□□□□ -0.37
Col6a5A6H584 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC12.73□□□□□ -0.37
Col6a5A6H584 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Gm25857-201ENSMUST00000082788 129 ntBASIC12.73□□□□□ -0.37
Col6a5A6H584 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Col6a5A6H584 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col6a5A6H584 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Col6a5A6H584 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms