Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trbv13-2A0A140T8N6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-2A0A140T8N6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-2A0A140T8N6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-2A0A140T8N6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Trbv13-2A0A140T8N6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv13-2A0A140T8N6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-2A0A140T8N6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv13-2A0A140T8N6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trbv13-2A0A140T8N6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv13-2A0A140T8N6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv13-2A0A140T8N6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm21814-202ENSMUST00000203277 873 ntBASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm5417-201ENSMUST00000079706 384 ntBASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms