Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-28A0A0G2JE47 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gm11620-201ENSMUST00000118770 1845 ntBASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Mir8112-201ENSMUST00000184382 131 ntBASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Cdc34b-202ENSMUST00000188741 1252 ntBASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igkv8-28A0A0G2JE47 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms