Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.76□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.76□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Asic1-205ENSMUST00000228185 1818 ntBASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tcrg-V4A0A0B4J1J8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms