Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gm15794-201ENSMUST00000120182 631 ntBASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gm27742-201ENSMUST00000184667 60 ntBASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Olfr129-201ENSMUST00000122318 993 ntBASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.21■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Igkv5-43A0A0B4J1J2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm27357-201ENSMUST00000183754 135 ntBASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms