Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trbv5A0A0B4J1G9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Gm27454-201ENSMUST00000185090 204 ntBASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv5A0A0B4J1G9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv5A0A0B4J1G9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Gm10418-201ENSMUST00000100943 576 ntBASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv5A0A0B4J1G9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms