Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm43183-201ENSMUST00000200632 547 ntBASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav21-dv12A0A075B6C4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav21-dv12A0A075B6C4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav21-dv12A0A075B6C4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav21-dv12A0A075B6C4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav21-dv12A0A075B6C4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav21-dv12A0A075B6C4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav21-dv12A0A075B6C4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav21-dv12A0A075B6C4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav21-dv12A0A075B6C4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav21-dv12A0A075B6C4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav21-dv12A0A075B6C4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav21-dv12A0A075B6C4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav21-dv12A0A075B6C4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav21-dv12A0A075B6C4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav21-dv12A0A075B6C4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav21-dv12A0A075B6C4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav21-dv12A0A075B6C4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav21-dv12A0A075B6C4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav21-dv12A0A075B6C4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav21-dv12A0A075B6C4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav21-dv12A0A075B6C4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav21-dv12A0A075B6C4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gm45244-201ENSMUST00000211328 2200 ntBASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav21-dv12A0A075B6C4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gm5643-201ENSMUST00000117081 966 ntBASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gm15378-201ENSMUST00000121894 207 ntBASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms