Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Gm13401-201ENSMUST00000117074 291 ntBASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Gm13234-201ENSMUST00000120010 747 ntBASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Gm6139-201ENSMUST00000079261 882 ntBASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-5A0A075B6B5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-5A0A075B6B5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Mir2861-201ENSMUST00000175539 82 ntBASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Gm13241-201ENSMUST00000094493 780 ntBASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-5A0A075B6B5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms