Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9d-3A0A075B695 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9d-3A0A075B695 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9d-3A0A075B695 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9d-3A0A075B695 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Gm10698-201ENSMUST00000182663 604 ntBASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.08□□□□□ -0.48
Trav9d-3A0A075B695 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9d-3A0A075B695 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms