Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav17A0A075B655 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Mir6349-201ENSMUST00000184059 97 ntBASIC13.47□□□□□ -0.25
Trav17A0A075B655 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav17A0A075B655 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav17A0A075B655 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.46□□□□□ -0.25
Trav17A0A075B655 Gm5874-201ENSMUST00000096101 508 ntBASIC13.46□□□□□ -0.25
Trav17A0A075B655 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav17A0A075B655 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.46□□□□□ -0.25
Trav17A0A075B655 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav17A0A075B655 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav17A0A075B655 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav17A0A075B655 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav17A0A075B655 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav17A0A075B655 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav17A0A075B655 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav17A0A075B655 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trav17A0A075B655 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav17A0A075B655 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Gm26524-201ENSMUST00000192339 390 ntBASIC13.45□□□□□ -0.26
Trav17A0A075B655 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav17A0A075B655 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav17A0A075B655 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.44□□□□□ -0.26
Trav17A0A075B655 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms