Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav16A0A075B653 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16A0A075B653 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.11□□□□□ -0.31
Trav16A0A075B653 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.11□□□□□ -0.31
Trav16A0A075B653 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Gm7514-201ENSMUST00000209475 934 ntBASIC13.11□□□□□ -0.31
Trav16A0A075B653 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav16A0A075B653 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav16A0A075B653 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav16A0A075B653 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.11□□□□□ -0.31
Trav16A0A075B653 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.1□□□□□ -0.31
Trav16A0A075B653 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16A0A075B653 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.09□□□□□ -0.31
Trav16A0A075B653 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav16A0A075B653 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.31
Trav16A0A075B653 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms