Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Gm12251-201ENSMUST00000117893 792 ntBASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Flvcr1-202ENSMUST00000191946 1216 ntBASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8-1A0A075B641 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Smad6-203ENSMUST00000179458 273 ntBASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8-1A0A075B641 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8-1A0A075B641 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav8-1A0A075B641 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms