Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Actl10-202ENSMUST00000226583 1501 ntBASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Gm18032-201ENSMUST00000222541 538 ntBASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12n-2A0A075B626 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Gm18101-201ENSMUST00000215769 548 ntBASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12n-2A0A075B626 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Gm22697-201ENSMUST00000175194 63 ntBASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12n-2A0A075B626 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav12n-2A0A075B626 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12n-2A0A075B626 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12n-2A0A075B626 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12n-2A0A075B626 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12n-2A0A075B626 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms