Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm10849-201ENSMUST00000100397 618 ntBASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Mir5133-201ENSMUST00000174955 77 ntBASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm13148-201ENSMUST00000118892 745 ntBASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm15375-201ENSMUST00000119510 849 ntBASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm5408-201ENSMUST00000197998 747 ntBASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm42569-201ENSMUST00000200539 472 ntBASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm4968-201ENSMUST00000071458 858 ntBASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-1-dv6d-1A0A075B624 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm2559-201ENSMUST00000201323 363 ntBASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-1-dv6d-1A0A075B624 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms