Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 AC112255.1-201ENST00000624070 2493 ntBASIC6.82□□□□□ -1.32
CDK5RAP3Q96JB5 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC016583.1-201ENST00000624221 2431 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 GCNT1P4-201ENST00000404096 329 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 MTCO1P45-201ENST00000431457 267 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 RPL5P7-201ENST00000444235 813 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC016027.4-201ENST00000450866 277 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 SLC25A51P1-201ENST00000468432 871 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC021006.1-201ENST00000489849 553 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 CCDC11P1-201ENST00000503137 1162 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC008945.1-201ENST00000505144 499 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 HMGB1P47-201ENST00000511281 589 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 RNU6-889P-201ENST00000517189 103 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AP003080.1-202ENST00000526526 915 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC002519.2-203ENST00000567043 837 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 MIR4502-201ENST00000580432 81 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 LSM1P2-201ENST00000604911 322 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 HMGB1P51-201ENST00000605166 638 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AP001002.2-201ENST00000625137 386 ntBASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.81□□□□□ -1.32
CDK5RAP3Q96JB5 AC239868.2-201ENST00000564237 4527 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 MTND4P9-201ENST00000507819 1346 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 RNA5SP110-201ENST00000362638 115 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 SNORD51.1-201ENST00000365405 77 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 GCNT6-201ENST00000379591 934 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 MIR620-201ENST00000385232 95 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 RN7SKP166-201ENST00000410812 305 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 PTCD2P2-201ENST00000415579 1095 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 DPPA2P2-201ENST00000418220 897 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AC019205.1-201ENST00000421830 730 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 FTLP8-201ENST00000446770 267 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AC093166.3-201ENST00000448785 303 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 YRDCP3-201ENST00000456507 480 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AC093763.2-201ENST00000505334 1223 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 RN7SKP183-201ENST00000517169 324 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 BCAS2P1-201ENST00000528022 632 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AP000619.2-201ENST00000546014 969 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AL121839.1-201ENST00000556233 1185 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 MIR4701-201ENST00000583094 63 ntBASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.8□□□□□ -1.32
CDK5RAP3Q96JB5 AC015911.5-201ENST00000587076 451 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms