Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 MIR4433B-201ENST00000581329 102 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AL513327.3-201ENST00000602618 469 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AL133481.2-203ENST00000607558 139 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 LINC01963-201ENST00000562038 3148 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 MRE11P1-201ENST00000464884 2127 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 RNA5SP131-201ENST00000365452 119 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AC113412.1-201ENST00000425840 504 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 RPL34P27-201ENST00000428810 349 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 RPL12P16-201ENST00000431098 498 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AC002504.1-201ENST00000438281 691 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AC005297.1-201ENST00000444765 862 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 RPL36AP39-201ENST00000445859 318 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 RPS23P2-201ENST00000463671 415 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 PDCL3P4-201ENST00000489621 720 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 RNU6-964P-201ENST00000516524 69 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AC090607.5-201ENST00000615692 224 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AL031658.2-201ENST00000616850 651 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AC241377.1-201ENST00000619797 406 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 CU639417.4-201ENST00000623928 207 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AC093297.3-201ENST00000607056 2517 ntBASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ECHDC3Q96DC8 AL034546.1-201ENST00000623740 3693 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 DNM1P47-203ENST00000571780 12667 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 AC087752.1-201ENST00000391360 558 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 RN7SKP286-201ENST00000410894 299 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 RN7SKP293-201ENST00000411389 296 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 NAP1L4P2-201ENST00000425958 899 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 Z84478.1-201ENST00000438230 1219 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 BX679664.2-201ENST00000439282 283 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 AC087672.1-201ENST00000479876 766 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 DUTP1-201ENST00000493631 470 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 IGLVIV-64-201ENST00000518581 301 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 HIRAP1-201ENST00000605318 787 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 RN7SL787P-201ENST00000613000 284 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 AL035661.1-201ENST00000620459 1144 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 SRRM1P3-201ENST00000426911 2678 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 AC018628.1-201ENST00000624147 3819 ntBASIC5.73□□□□□ -1.49
ECHDC3Q96DC8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ECHDC3Q96DC8 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms