Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 HMGB1P32-201ENST00000425971 565 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 AL512605.1-202ENST00000441919 381 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 GAPDHP23-201ENST00000444823 993 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 AL359955.2-201ENST00000445380 353 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 RPL7L1P3-201ENST00000455249 689 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 RN7SL273P-201ENST00000481561 299 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 RWDD4P1-201ENST00000488019 565 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 RN7SL193P-201ENST00000491708 276 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AL136038.1-201ENST00000497246 351 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AC114781.3-201ENST00000512083 142 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AP000648.1-201ENST00000529682 397 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 RPA2P3-201ENST00000533268 770 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 AC092865.1-201ENST00000544395 1023 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 AP001496.3-201ENST00000580230 913 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 AL583832.1-201ENST00000603227 784 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AL031601.1-201ENST00000605702 394 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AC007620.3-201ENST00000608131 497 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AC069234.4-201ENST00000621276 412 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AL049767.1-202ENST00000637826 242 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AC116667.2-201ENST00000641075 823 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 HDAC1P2-201ENST00000453661 1398 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 RBPJP7-201ENST00000442803 1447 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 RBPJP5-201ENST00000449433 1447 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 AC140134.1-201ENST00000511830 3544 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AP001541.1-201ENST00000623322 1904 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF4Q92544 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF4Q92544 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF4Q92544 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF4Q92544 MIR433-201ENST00000384837 93 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TM9SF4Q92544 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AL096800.1-201ENST00000405326 893 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 RN7SKP293-201ENST00000411389 296 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 MARK2P12-201ENST00000420129 585 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC079355.1-201ENST00000421770 223 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AL590399.2-201ENST00000427536 309 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 UBE2V2P1-201ENST00000434717 398 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AL445466.1-201ENST00000448432 357 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 NDUFA5P8-201ENST00000449019 346 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC114876.1-201ENST00000490962 1366 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC147055.1-201ENST00000509261 750 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 CR383656.5-201ENST00000547616 1340 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 TMF1P1-201ENST00000576058 373 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 MIR4776-2-201ENST00000580204 80 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 AC233968.1-201ENST00000611212 1300 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 MIR6826-201ENST00000617808 98 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 AL136228.1-201ENST00000622221 319 ntBASIC5.61□□□□□ -1.51
TM9SF4Q92544 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TM9SF4Q92544 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms