Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 RNA5SP77-201ENST00000365394 120 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 OR1F12-201ENST00000402365 945 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AL358178.1-201ENST00000407698 397 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 RPS26P38-201ENST00000414476 348 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 GAPDHP33-201ENST00000443168 1013 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 RN7SL39P-201ENST00000462264 297 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AL049829.1-201ENST00000465411 156 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC099340.1-201ENST00000475247 599 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AP001804.2-201ENST00000533932 910 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC005000.1-201ENST00000536192 288 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AL121839.1-201ENST00000556233 1185 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 RN7SL208P-201ENST00000577964 296 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AP001437.1-201ENST00000608783 456 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 MIR6748-201ENST00000610433 71 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 U1.41-201ENST00000617626 165 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 MRPL57P1-201ENST00000621486 265 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC073592.7-201ENST00000623659 507 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AL357140.4-201ENST00000636827 412 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 LINC02019-201ENST00000608605 2060 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 PSMC1P4-201ENST00000515236 1327 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC232271.1-201ENST00000602455 2715 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC023245.2-201ENST00000530760 2978 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 RNA5SP478-201ENST00000364657 115 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AL590635.1-201ENST00000406314 586 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 UBE2V1P14-201ENST00000415815 558 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 MTND4LP7-201ENST00000431728 294 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 RAB9AP5-201ENST00000437794 597 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AL138787.1-202ENST00000437804 898 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AL390879.1-201ENST00000439143 386 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AL691517.1-201ENST00000440833 1235 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 MTCO3P43-201ENST00000440974 771 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 RAB9AP2-201ENST00000443911 597 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 COX4I1P2-201ENST00000447446 547 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC073850.1-201ENST00000449243 255 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 RPL7L1P3-201ENST00000455249 689 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 FTH1P2-201ENST00000466086 412 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 RPS26P39-201ENST00000469206 341 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 OR9N1P-201ENST00000491296 333 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 RPL5P14-201ENST00000494197 878 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC106800.3-201ENST00000511389 308 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC093664.1-201ENST00000511779 289 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 IGKV2-19-201ENST00000518132 283 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC022826.1-201ENST00000519383 805 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms