Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC093166.4-201ENST00000457867 318 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 RNU6-599P-201ENST00000459383 107 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 RNU6-1193P-201ENST00000459461 107 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 AC090543.1-201ENST00000492168 485 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.1□□□□□ -1.27
RHBDL3P58872 FABP5P6-201ENST00000510588 409 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 SNORA70.20-201ENST00000516848 126 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.1□□□□□ -1.27
RHBDL3P58872 HMGN2P36-201ENST00000529541 409 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 AC091078.2-201ENST00000557145 559 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 AC007494.1-201ENST00000562293 760 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 AC010547.6-201ENST00000571789 193 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 AC015802.2-201ENST00000589690 189 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.1□□□□□ -1.27
RHBDL3P58872 AC011497.2-201ENST00000600255 639 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 AC027334.1-201ENST00000603257 310 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 uc_338.26-201ENST00000612659 160 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 AL512624.1-201ENST00000613638 469 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 RNU6-368P-201ENST00000620928 107 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 RNU6-538P-201ENST00000622329 107 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 AC019080.5-201ENST00000624891 757 ntBASIC7.1□□□□□ -1.27
RHBDL3P58872 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.1□□□□□ -1.27
RHBDL3P58872 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RHBDL3P58872 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.1□□□□□ -1.27
RHBDL3P58872 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RHBDL3P58872 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.1□□□□□ -1.27
RHBDL3P58872 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
RHBDL3P58872 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.1□□□□□ -1.27
RHBDL3P58872 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.1□□□□□ -1.27
RHBDL3P58872 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RHBDL3P58872 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.1□□□□□ -1.27
RHBDL3P58872 AL117339.4-201ENST00000608335 7063 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 PARP4P2-201ENST00000446672 3326 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.09□□□□□ -1.27
RHBDL3P58872 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.09□□□□□ -1.27
RHBDL3P58872 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 AC003973.3-201ENST00000624863 2822 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 SNORA64.1-201ENST00000362600 132 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 MIR421-201ENST00000365696 85 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 U3.25-201ENST00000391209 220 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 GAPDHP15-201ENST00000398586 975 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 RPS4XP5-201ENST00000419038 768 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RHBDL3P58872 AC007563.3-201ENST00000433233 371 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 Z99127.2-201ENST00000441426 334 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 DNAJC19P5-201ENST00000443295 316 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 AL500527.1-201ENST00000448532 255 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 TAAR4P-201ENST00000454843 1039 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.09□□□□□ -1.27
RHBDL3P58872 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC7.09□□□□□ -1.27
RHBDL3P58872 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.09□□□□□ -1.27
RHBDL3P58872 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 AC015864.1-201ENST00000496512 544 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 MTND2P31-201ENST00000512602 616 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 AC016550.3-201ENST00000515706 767 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 OR10D4P-201ENST00000525892 951 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.09□□□□□ -1.27
RHBDL3P58872 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC7.09□□□□□ -1.27
RHBDL3P58872 FAM106CP-201ENST00000582212 507 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 AL133247.2-201ENST00000603236 482 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.09□□□□□ -1.27
RHBDL3P58872 AL162574.2-201ENST00000614618 657 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 AC022919.1-201ENST00000624979 626 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.09□□□□□ -1.27
RHBDL3P58872 HPVC1-201ENST00000629899 1198 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.09□□□□□ -1.27
RHBDL3P58872 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.09□□□□□ -1.27
RHBDL3P58872 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 AC068870.3-201ENST00000625077 2536 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 AC083837.1-201ENST00000565297 2994 ntBASIC7.09□□□□□ -1.27
RHBDL3P58872 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.09□□□□□ -1.27
RHBDL3P58872 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RHBDL3P58872 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
RHBDL3P58872 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.09□□□□□ -1.28
RHBDL3P58872 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
RHBDL3P58872 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RHBDL3P58872 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.08□□□□□ -1.28
RHBDL3P58872 AC097063.1-201ENST00000426714 1797 ntBASIC7.08□□□□□ -1.28
RHBDL3P58872 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RHBDL3P58872 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RHBDL3P58872 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms