Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC110749.1-201ENST00000462007 357 ntBASIC6.34□□□□□ -1.39
CLCN3P51790 SLC25A51P1-201ENST00000468432 871 ntBASIC6.34□□□□□ -1.39
CLCN3P51790 AC007688.1-201ENST00000475592 759 ntBASIC6.34□□□□□ -1.39
CLCN3P51790 RN7SL177P-201ENST00000476596 299 ntBASIC6.34□□□□□ -1.39
CLCN3P51790 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.34□□□□□ -1.39
CLCN3P51790 EIF3LP3-201ENST00000495197 822 ntBASIC6.34□□□□□ -1.39
CLCN3P51790 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.34□□□□□ -1.39
CLCN3P51790 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.34□□□□□ -1.39
CLCN3P51790 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.34□□□□□ -1.39
CLCN3P51790 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CLCN3P51790 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.34□□□□□ -1.39
CLCN3P51790 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.34□□□□□ -1.39
CLCN3P51790 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.34□□□□□ -1.39
CLCN3P51790 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CLCN3P51790 DPPA3P2-202ENST00000557188 1219 ntBASIC6.34□□□□□ -1.39
CLCN3P51790 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.34□□□□□ -1.39
CLCN3P51790 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.34□□□□□ -1.39
CLCN3P51790 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.34□□□□□ -1.39
CLCN3P51790 MIR1273E-201ENST00000581165 102 ntBASIC6.34□□□□□ -1.39
CLCN3P51790 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.34□□□□□ -1.39
CLCN3P51790 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.34□□□□□ -1.39
CLCN3P51790 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.34□□□□□ -1.39
CLCN3P51790 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.34□□□□□ -1.39
CLCN3P51790 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLCN3P51790 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.34□□□□□ -1.39
CLCN3P51790 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLCN3P51790 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.34□□□□□ -1.39
CLCN3P51790 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CLCN3P51790 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLCN3P51790 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CLCN3P51790 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CLCN3P51790 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CLCN3P51790 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
CLCN3P51790 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
CLCN3P51790 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CLCN3P51790 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CLCN3P51790 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
CLCN3P51790 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 RARSP1-201ENST00000542842 1418 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.33□□□□□ -1.4
CLCN3P51790 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CLCN3P51790 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CLCN3P51790 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.33□□□□□ -1.4
CLCN3P51790 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CLCN3P51790 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CLCN3P51790 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.33□□□□□ -1.4
CLCN3P51790 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.33□□□□□ -1.4
CLCN3P51790 AL390119.1-201ENST00000440329 312 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.33□□□□□ -1.4
CLCN3P51790 RPS3AP15-201ENST00000483874 781 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 RN7SL570P-201ENST00000484405 292 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 RN7SL214P-201ENST00000487317 265 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 AC073610.1-201ENST00000489971 396 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.33□□□□□ -1.4
CLCN3P51790 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.33□□□□□ -1.4
CLCN3P51790 AC105384.2-201ENST00000508433 640 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 TOMM22P4-201ENST00000511318 336 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.33□□□□□ -1.4
CLCN3P51790 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.33□□□□□ -1.4
CLCN3P51790 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.33□□□□□ -1.4
CLCN3P51790 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.33□□□□□ -1.4
CLCN3P51790 AC090022.1-201ENST00000546569 311 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.33□□□□□ -1.4
CLCN3P51790 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.33□□□□□ -1.4
CLCN3P51790 HSPE1P2-201ENST00000554777 306 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.33□□□□□ -1.4
CLCN3P51790 MIR3176-201ENST00000582210 90 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 AC087468.1-201ENST00000604365 630 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 AC016911.1-201ENST00000613297 452 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 AL118556.2-201ENST00000614375 824 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 AL157762.1-201ENST00000619612 415 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.33□□□□□ -1.4
CLCN3P51790 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.33□□□□□ -1.4
CLCN3P51790 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLCN3P51790 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.33□□□□□ -1.4
CLCN3P51790 MFSD8-239ENST00000641590 2479 ntBASIC6.33□□□□□ -1.4
CLCN3P51790 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.32□□□□□ -1.4
CLCN3P51790 RN7SKP160-201ENST00000363804 340 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 RN7SKP124-201ENST00000364730 341 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 MIR130A-201ENST00000385274 89 ntBASIC6.32□□□□□ -1.4
CLCN3P51790 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms