Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 AL353662.1-201ENST00000439099 327 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 RPL6P30-201ENST00000443382 862 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 BMS1P10-201ENST00000443754 1120 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 RPL5P7-201ENST00000444235 813 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 AC097463.1-201ENST00000447288 481 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 AC006539.1-201ENST00000481419 501 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 RPL29P23-201ENST00000486188 442 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 GUSBP9-201ENST00000510138 584 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 OR4A41P-201ENST00000533053 928 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 AC084824.2-201ENST00000548906 345 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 AC004232.2-201ENST00000574245 821 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 MIR4660-201ENST00000583549 74 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 AL136131.3-201ENST00000607600 188 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 BNIP3P41-202ENST00000616656 861 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 AC099654.6-201ENST00000636487 512 ntBASIC6.31□□□□□ -1.4
CCDC172P0C7W6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC172P0C7W6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 SELENOWP1-201ENST00000322792 252 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 RN7SKP250-201ENST00000363924 321 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 RNA5SP431-201ENST00000410312 120 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AL359885.1-201ENST00000415786 903 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 THEM7P-201ENST00000419556 672 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 OR6C64P-201ENST00000419708 825 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AC023141.3-201ENST00000436698 278 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 MEMO1P4-201ENST00000453590 386 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 RN7SL188P-201ENST00000469842 285 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 OR7E99P-201ENST00000505750 922 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AC121758.1-202ENST00000556917 658 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 GARSP1-201ENST00000570895 719 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AC011500.1-201ENST00000601963 469 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AC005479.3-201ENST00000602790 431 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 uc_338.31-201ENST00000615595 186 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 AC079776.5-201ENST00000641920 211 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 QRSL1P1-201ENST00000400977 1540 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CCDC172P0C7W6 PCAT14-202ENST00000627127 3935 ntBASIC6.3□□□□□ -1.4
CCDC172P0C7W6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 AC117409.1-201ENST00000470499 1310 ntBASIC6.29□□□□□ -1.4
CCDC172P0C7W6 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 RNU6-249P-201ENST00000363016 102 ntBASIC6.29□□□□□ -1.4
CCDC172P0C7W6 U3.10-201ENST00000364459 214 ntBASIC6.29□□□□□ -1.4
CCDC172P0C7W6 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 SETP15-201ENST00000412724 337 ntBASIC6.29□□□□□ -1.4
CCDC172P0C7W6 AL158827.1-201ENST00000416300 391 ntBASIC6.29□□□□□ -1.4
CCDC172P0C7W6 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 AC019205.1-201ENST00000421830 730 ntBASIC6.29□□□□□ -1.4
CCDC172P0C7W6 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 KIF4CP-201ENST00000422742 1279 ntBASIC6.29□□□□□ -1.4
CCDC172P0C7W6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC172P0C7W6 RN7SL568P-201ENST00000493069 298 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms