Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC009852.2-201ENST00000567898 485 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AP001823.1-201ENST00000604056 1003 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 HIRAP1-201ENST00000605318 787 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 SNORA35B-201ENST00000607417 129 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC073575.2-201ENST00000614212 627 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 MIR6849-201ENST00000618543 69 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AL445670.1-201ENST00000618889 801 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 MIR6503-201ENST00000622884 86 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 PARP4P2-201ENST00000446672 3326 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC007938.2-201ENST00000604666 2634 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 MTND2P12-201ENST00000417560 1252 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AL360013.1-201ENST00000419031 858 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 OR10T1P-201ENST00000424327 947 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 RPL12P12-201ENST00000424633 501 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC106901.1-201ENST00000425086 698 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 VN1R21P-201ENST00000426703 765 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC099677.3-201ENST00000427081 395 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 MTCO1P51-201ENST00000427672 1060 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AL121578.1-201ENST00000428051 892 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC094019.1-201ENST00000434678 472 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AL645936.1-201ENST00000441979 518 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AL158214.1-201ENST00000444423 404 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 RPS23P9-201ENST00000448848 438 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 MEMO1P4-201ENST00000453590 386 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AL354872.1-201ENST00000456361 967 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 EIF3LP2-201ENST00000457262 807 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC104164.1-201ENST00000460282 590 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 RN7SL83P-201ENST00000468131 297 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 NPM1P52-201ENST00000518264 846 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC021269.1-201ENST00000526860 705 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC084851.2-201ENST00000530377 364 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AL358913.1-201ENST00000554342 121 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC091304.5-201ENST00000568969 158 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC068408.1-201ENST00000577406 1144 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 MIR4732-201ENST00000581873 76 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC036176.3-201ENST00000602456 418 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC092944.2-201ENST00000605443 889 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC023206.1-201ENST00000605824 298 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC083964.1-201ENST00000607549 630 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 Z95327.3-201ENST00000610385 572 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC138965.3-201ENST00000623875 498 ntBASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.87□□□□□ -1.79
SND1-IT1Q9HBX3 AC119674.1-202ENST00000641333 1860 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms