Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 RPS6P23-201ENST00000413224 722 ntBASIC8.57□□□□□ -1.04
SCAPERQ9BY12 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 PRUNEP1-201ENST00000425846 705 ntBASIC8.57□□□□□ -1.04
SCAPERQ9BY12 AK3P5-201ENST00000432033 519 ntBASIC8.57□□□□□ -1.04
SCAPERQ9BY12 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 AZGP1P2-201ENST00000454506 345 ntBASIC8.57□□□□□ -1.04
SCAPERQ9BY12 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 CYP4F27P-201ENST00000514557 494 ntBASIC8.57□□□□□ -1.04
SCAPERQ9BY12 RN7SKP288-201ENST00000516227 268 ntBASIC8.57□□□□□ -1.04
SCAPERQ9BY12 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 AC012557.1-201ENST00000607115 611 ntBASIC8.57□□□□□ -1.04
SCAPERQ9BY12 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 WWOX-217ENST00000620008 450 ntTSL 2 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 AC091953.3-201ENST00000623220 236 ntBASIC8.57□□□□□ -1.04
SCAPERQ9BY12 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 ZNF733P-202ENST00000444809 1573 ntBASIC8.57□□□□□ -1.04
SCAPERQ9BY12 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 RPL26P29-201ENST00000415623 438 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 LDHAP2-201ENST00000437325 985 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 RPS29P22-201ENST00000472363 168 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AC109462.1-201ENST00000491087 368 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 RN7SL447P-201ENST00000494711 245 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 SNRPCP2-201ENST00000504370 475 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AC078878.1-201ENST00000539832 958 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AC011497.2-201ENST00000600255 639 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AC009163.6-201ENST00000612367 342 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AC025574.2-201ENST00000615621 514 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AC105105.5-201ENST00000622635 1294 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 SPATA31C1-201ENST00000420021 3895 ntBASIC8.56□□□□□ -1.04
SCAPERQ9BY12 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SCAPERQ9BY12 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 MIR141-201ENST00000384975 95 ntBASIC8.55□□□□□ -1.04
SCAPERQ9BY12 DUTP5-201ENST00000406790 469 ntBASIC8.55□□□□□ -1.04
SCAPERQ9BY12 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 AC093890.1-201ENST00000502554 540 ntBASIC8.55□□□□□ -1.04
SCAPERQ9BY12 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 PRELID3BP3-201ENST00000584963 545 ntBASIC8.55□□□□□ -1.04
SCAPERQ9BY12 AL683813.2-201ENST00000605245 502 ntBASIC8.55□□□□□ -1.04
SCAPERQ9BY12 AC004890.3-201ENST00000605566 1095 ntBASIC8.55□□□□□ -1.04
SCAPERQ9BY12 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC8.55□□□□□ -1.04
SCAPERQ9BY12 AC090607.5-201ENST00000615692 224 ntBASIC8.55□□□□□ -1.04
SCAPERQ9BY12 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 AC011493.1-201ENST00000596753 1632 ntBASIC8.55□□□□□ -1.04
SCAPERQ9BY12 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 AC022819.1-201ENST00000563495 3910 ntBASIC8.55□□□□□ -1.04
SCAPERQ9BY12 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
SCAPERQ9BY12 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC009220.1-201ENST00000451614 275 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 RPL7P6-201ENST00000480903 738 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC105384.2-201ENST00000508433 640 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms