Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC138761.5-201ENST00000433967 325 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 PCBP2P1-201ENST00000437262 977 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AC098847.1-201ENST00000473094 348 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 RPL32P33-201ENST00000487023 394 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 RN7SL57P-201ENST00000493687 290 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 TRIM51DP-201ENST00000529746 596 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AC068305.2-201ENST00000550567 1205 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AC002310.3-201ENST00000569728 723 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AC008507.3-201ENST00000585753 472 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AL353729.2-201ENST00000605859 1249 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AC015982.1-201ENST00000608113 465 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AC005618.4-201ENST00000625053 554 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AL078595.2-201ENST00000605309 1780 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 NPM1P38-201ENST00000403835 865 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AL158827.1-201ENST00000416300 391 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 NAP1L4P2-201ENST00000425958 899 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AMYP1-201ENST00000440059 1023 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 RPSAP51-201ENST00000497462 645 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 OR5H7P-201ENST00000514084 930 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AC007956.1-201ENST00000555623 542 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AC063977.5-201ENST00000601044 974 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AP001962.1-201ENST00000624114 559 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 GTF2IP4-201ENST00000453092 2054 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 AC083837.1-201ENST00000565297 2994 ntBASIC5.25□□□□□ -1.57
RSPO3Q9BXY4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 GAPDHP24-201ENST00000328713 983 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 RN7SKP145-201ENST00000363291 303 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC019205.1-201ENST00000421830 730 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 VN1R21P-201ENST00000426703 765 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 RPL6P30-201ENST00000443382 862 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms