Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 RPSAP39-201ENST00000467439 883 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC092824.1-201ENST00000483524 576 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC104629.1-201ENST00000494226 508 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 OOSP1P2-201ENST00000579644 351 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC233702.7-202ENST00000582941 211 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC027229.1-201ENST00000583887 253 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 COX6CP7-201ENST00000597056 208 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 AL352984.2-201ENST00000611153 546 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGB4Q8WW32 OR8G3P-202ENST00000641572 1255 ntBASIC6.15□□□□□ -1.42
HMGB4Q8WW32 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
HMGB4Q8WW32 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HMGB4Q8WW32 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.15□□□□□ -1.43
HMGB4Q8WW32 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.15□□□□□ -1.43
HMGB4Q8WW32 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
HMGB4Q8WW32 NAMPTP1-201ENST00000440465 2514 ntBASIC6.15□□□□□ -1.43
HMGB4Q8WW32 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC034229.2-201ENST00000566945 2508 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 RNA5SP375-201ENST00000362975 119 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 MIR433-201ENST00000384837 93 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 MTND4P24-201ENST00000424002 397 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 LYPLA1P1-201ENST00000434514 622 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 TUBB4BP6-201ENST00000437576 479 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 BZW1P1-201ENST00000454901 1240 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 SNX18P26-201ENST00000458433 740 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 FABP5P6-201ENST00000510588 409 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 HMGB1P47-201ENST00000511281 589 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AL450270.1-201ENST00000606160 391 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC012213.4-201ENST00000606457 354 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 FAM72A-208ENST00000607379 1139 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC024255.1-201ENST00000614376 102 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC022467.1-201ENST00000614738 749 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AL596275.2-208ENST00000641192 594 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 MAPK10-287ENST00000641217 3037 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 AC110792.3-201ENST00000595906 1614 ntBASIC6.14□□□□□ -1.43
HMGB4Q8WW32 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB4Q8WW32 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 TNPO1P2-201ENST00000426249 2665 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 AP000866.6-201ENST00000638898 3579 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB4Q8WW32 FUNDC2P3-201ENST00000334716 533 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 FAM32BP-201ENST00000344033 333 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 RNU1-150P-201ENST00000362491 162 ntBASIC6.13□□□□□ -1.43
HMGB4Q8WW32 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms