Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 UBFD1P1-201ENST00000473259 814 ntBASIC6.1□□□□□ -1.43
LMO3Q8TAP4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 PFN1P8-201ENST00000497012 543 ntBASIC6.1□□□□□ -1.43
LMO3Q8TAP4 AC019227.1-201ENST00000526902 510 ntBASIC6.1□□□□□ -1.43
LMO3Q8TAP4 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 AC122134.1-202ENST00000569111 1201 ntBASIC6.1□□□□□ -1.43
LMO3Q8TAP4 AC233699.1-201ENST00000569955 1168 ntBASIC6.1□□□□□ -1.43
LMO3Q8TAP4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 AC018809.2-201ENST00000602436 3823 ntBASIC6.1□□□□□ -1.43
LMO3Q8TAP4 AL162574.2-201ENST00000614618 657 ntBASIC6.1□□□□□ -1.43
LMO3Q8TAP4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 PWAR1-201ENST00000624188 2414 ntBASIC6.1□□□□□ -1.43
LMO3Q8TAP4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.1□□□□□ -1.43
LMO3Q8TAP4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 AL161901.1-201ENST00000624954 3425 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 NEPNP-201ENST00000404786 1371 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 TTC41P-205ENST00000551270 3963 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 OR52B3P-201ENST00000314715 928 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 AL121886.1-201ENST00000358609 435 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 SLC20A1P1-201ENST00000413906 956 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 NANOGP9-201ENST00000439890 892 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 ACA64.1-201ENST00000459171 127 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 AC022215.1-201ENST00000481770 362 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 ABCA11P-202ENST00000504019 2110 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 RN7SKP70-201ENST00000516655 271 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 SNORA70.20-201ENST00000516848 126 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 HMGB1P42-201ENST00000532126 553 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 AC105036.1-201ENST00000566222 271 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 AL354950.1-201ENST00000614150 568 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 MIR1910-201ENST00000636955 80 ntBASIC6.09□□□□□ -1.43
LMO3Q8TAP4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.09□□□□□ -1.43
LMO3Q8TAP4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.44
LMO3Q8TAP4 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 RN7SKP185-201ENST00000362813 326 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 RNA5SP131-201ENST00000365452 119 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 HMGB1P20-201ENST00000402555 677 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 BX276092.6-201ENST00000430476 250 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 BX276092.8-201ENST00000455722 250 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 NDUFA5P5-201ENST00000468361 342 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AC111000.5-201ENST00000506559 1178 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AC084824.2-201ENST00000548906 345 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 SNRPGP1-201ENST00000553864 222 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 MIR4311-201ENST00000580794 100 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AC079315.1-201ENST00000602952 623 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AL365181.4-201ENST00000609800 547 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AC090607.5-201ENST00000615692 224 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AC005618.4-201ENST00000625053 554 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AC091305.2-201ENST00000624049 1576 ntBASIC6.08□□□□□ -1.44
LMO3Q8TAP4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LMO3Q8TAP4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms