Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AMYP1-201ENST00000440059 1023 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 ATP5LP2-201ENST00000440646 311 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN9P43378 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.18□□□□□ -1.42
PTPN9P43378 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN9P43378 RN7SL168P-201ENST00000463821 279 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.18□□□□□ -1.42
PTPN9P43378 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN9P43378 RNA5SP340-201ENST00000517132 107 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 AC104997.1-201ENST00000519761 717 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.18□□□□□ -1.42
PTPN9P43378 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
PTPN9P43378 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.18□□□□□ -1.42
PTPN9P43378 VN1R81P-201ENST00000602085 372 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 AL049840.6-201ENST00000604583 345 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 AC145423.1-201ENST00000605712 336 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.18□□□□□ -1.42
PTPN9P43378 AL590410.1-201ENST00000617925 333 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PTPN9P43378 LYARP1-201ENST00000436977 1501 ntBASIC6.18□□□□□ -1.42
PTPN9P43378 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN9P43378 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN9P43378 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN9P43378 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PTPN9P43378 RN7SKP128-201ENST00000364270 303 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 RPL12P43-201ENST00000420608 499 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.17□□□□□ -1.42
PTPN9P43378 AL445528.1-201ENST00000426330 420 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 TUBB4BP6-201ENST00000437576 479 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 VN1R110P-201ENST00000438988 971 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.17□□□□□ -1.42
PTPN9P43378 AC073072.2-201ENST00000447425 348 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 OSTCP1-201ENST00000455507 450 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 CST12P-201ENST00000457644 362 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 RN7SL170P-201ENST00000487098 295 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN9P43378 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.17□□□□□ -1.42
PTPN9P43378 AC093815.1-201ENST00000508637 280 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN9P43378 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.17□□□□□ -1.42
PTPN9P43378 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN9P43378 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.17□□□□□ -1.42
PTPN9P43378 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.17□□□□□ -1.42
PTPN9P43378 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.17□□□□□ -1.42
PTPN9P43378 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 LINC00556-201ENST00000569603 412 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 TXNP4-201ENST00000575018 310 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.17□□□□□ -1.42
PTPN9P43378 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.17□□□□□ -1.42
PTPN9P43378 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.17□□□□□ -1.42
PTPN9P43378 MIR6793-201ENST00000612376 63 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 AC026367.3-201ENST00000619032 590 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.17□□□□□ -1.42
PTPN9P43378 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN9P43378 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.17□□□□□ -1.42
PTPN9P43378 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.17□□□□□ -1.42
PTPN9P43378 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.17□□□□□ -1.42
PTPN9P43378 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.17□□□□□ -1.42
PTPN9P43378 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PTPN9P43378 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN9P43378 MTND4P21-201ENST00000453886 1357 ntBASIC6.17□□□□□ -1.42
PTPN9P43378 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
PTPN9P43378 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN9P43378 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PTPN9P43378 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PTPN9P43378 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms