Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 RNA5SP319-201ENST00000362768 119 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 RPL26P29-201ENST00000415623 438 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 CYCSP6-201ENST00000434498 302 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 RPL7P6-201ENST00000480903 738 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 MIR4646-201ENST00000580775 63 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 TAS2R6P-201ENST00000605022 826 ntBASIC8.45□□□□□ -1.06
SHANK2Q9UPX8 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AC112255.1-201ENST00000624070 2493 ntBASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AC083899.1-201ENST00000454465 3819 ntBASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 BX284632.1-201ENST00000478218 541 ntBASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 RPS21P4-201ENST00000487122 248 ntBASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 CSNK1A1P3-201ENST00000504105 330 ntBASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 MGST2-204ENST00000506797 634 ntTSL 2 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AP004607.2-201ENST00000533949 322 ntBASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AF230666.2-201ENST00000602328 725 ntBASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 AC132068.1-201ENST00000623805 459 ntBASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SHANK2Q9UPX8 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 ZNF840P-201ENST00000504759 1996 ntBASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 AP002991.2-201ENST00000623807 2801 ntBASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 SNORD1C-201ENST00000363315 78 ntBASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 AL121977.1-201ENST00000401636 979 ntBASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 AL356967.1-201ENST00000406305 431 ntBASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 AL390774.1-201ENST00000411924 246 ntBASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 AC016397.1-201ENST00000412463 242 ntBASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 VN1R21P-201ENST00000426703 765 ntBASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 OSTCP1-201ENST00000455507 450 ntBASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 RPL7P39-201ENST00000481157 744 ntBASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC8.43□□□□□ -1.06
SHANK2Q9UPX8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 MAPK10-304ENST00000641341 3984 ntBASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms