Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC138207.8-204ENST00000579588 527 ntBASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 MIR4660-201ENST00000583549 74 ntBASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 NANOGP3-201ENST00000605855 286 ntBASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 AC092681.3-201ENST00000609463 678 ntBASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 AL133243.2-201ENST00000610331 1621 ntBASIC5.41□□□□□ -1.54
CCNB1IP1Q9NPC3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 DDX18P6-201ENST00000450119 1997 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AC068870.3-201ENST00000625077 2536 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AC005005.4-201ENST00000623789 16698 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AP005435.3-201ENST00000531260 3198 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AP005432.1-201ENST00000580891 3485 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 U3.7-201ENST00000363668 216 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AC099782.1-201ENST00000425889 474 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 RPS10P18-201ENST00000442662 495 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AC098818.1-201ENST00000478593 252 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 RPL34P33-201ENST00000486062 334 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 ZNF519P4-201ENST00000514008 125 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 MAST4-IT1-201ENST00000514241 658 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 GAPDHP62-201ENST00000515313 990 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AC121758.1-202ENST00000556917 658 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AC009852.2-201ENST00000567898 485 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 LINC00556-201ENST00000569603 412 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AL078601.3-201ENST00000573303 535 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AL135999.3-201ENST00000610501 812 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AL162574.1-201ENST00000615702 950 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 AC244100.4-201ENST00000617747 388 ntBASIC5.4□□□□□ -1.54
CCNB1IP1Q9NPC3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCNB1IP1Q9NPC3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 AC007342.5-201ENST00000571340 2142 ntBASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 UGT2B24P-201ENST00000514441 1597 ntBASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 RNA5SP375-201ENST00000362975 119 ntBASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 RNU105B-201ENST00000364478 208 ntBASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 AL358178.1-201ENST00000407698 397 ntBASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 RPS15AP30-201ENST00000420976 390 ntBASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.39□□□□□ -1.55
CCNB1IP1Q9NPC3 OR10T1P-201ENST00000424327 947 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms