Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 RPL11P3-201ENST00000395256 523 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 RPS4XP5-201ENST00000419038 768 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC023141.8-201ENST00000442554 208 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 MED28P3-201ENST00000444288 531 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC006539.1-201ENST00000481419 501 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 OR7E99P-201ENST00000505750 922 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AL163952.1-202ENST00000569625 600 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC016839.1-201ENST00000578162 867 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 MIR5010-201ENST00000582846 120 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 MIR4701-201ENST00000583094 63 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 MIR6721-201ENST00000617181 87 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC073488.3-201ENST00000631611 778 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 RBPJP7-201ENST00000442803 1447 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 RBPJP5-201ENST00000449433 1447 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AC008627.1-201ENST00000517511 1704 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 AL360270.2-201ENST00000562952 5985 ntBASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC50Q8IVM0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 AC096775.1-201ENST00000437724 448 ntBASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 RPS12P17-201ENST00000438591 377 ntBASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 RPS10P18-201ENST00000442662 495 ntBASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 AC007383.1-201ENST00000445875 636 ntBASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 HMGB1P7-201ENST00000450921 612 ntBASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 AC023245.1-201ENST00000468501 517 ntBASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 EIF3LP3-201ENST00000495197 822 ntBASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 AL049840.6-201ENST00000604583 345 ntBASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC50Q8IVM0 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms