Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPCS3P61009 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.82□□□□□ -1.64
SPCS3P61009 RNA5SP206-201ENST00000516703 121 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 AP001000.1-201ENST00000526843 742 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.82□□□□□ -1.64
SPCS3P61009 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.82□□□□□ -1.64
SPCS3P61009 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.82□□□□□ -1.64
SPCS3P61009 AC090022.1-201ENST00000546569 311 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.82□□□□□ -1.64
SPCS3P61009 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.82□□□□□ -1.64
SPCS3P61009 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.82□□□□□ -1.64
SPCS3P61009 AL078624.2-201ENST00000605063 554 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 CLUHP10-201ENST00000631979 980 ntBASIC4.82□□□□□ -1.64
SPCS3P61009 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.82□□□□□ -1.64
SPCS3P61009 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPCS3P61009 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPCS3P61009 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPCS3P61009 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SPCS3P61009 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPCS3P61009 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.82□□□□□ -1.64
SPCS3P61009 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.81□□□□□ -1.64
SPCS3P61009 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 TRIM51GP-201ENST00000534741 1350 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SPCS3P61009 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 AP001642.1-201ENST00000624727 2117 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SPCS3P61009 U3.10-201ENST00000364459 214 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 RNA5SP85-201ENST00000365378 119 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.81□□□□□ -1.64
SPCS3P61009 MIR27A-201ENST00000385073 78 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 AL157702.1-201ENST00000398764 426 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 UBTFL2-201ENST00000411859 1191 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 CTSL3P-202ENST00000412179 788 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.81□□□□□ -1.64
SPCS3P61009 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.81□□□□□ -1.64
SPCS3P61009 RPL12P12-201ENST00000424633 501 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.81□□□□□ -1.64
SPCS3P61009 AC094019.1-201ENST00000434678 472 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.81□□□□□ -1.64
SPCS3P61009 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.81□□□□□ -1.64
SPCS3P61009 TCEA1P3-201ENST00000443005 880 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 MED28P3-201ENST00000444288 531 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 SDC4P-201ENST00000453285 601 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 AL034369.1-201ENST00000453808 477 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 RPL31P11-202ENST00000454082 372 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 RN7SL39P-201ENST00000462264 297 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 AL603882.1-201ENST00000463059 681 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 RPL34P33-201ENST00000486062 334 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.81□□□□□ -1.64
SPCS3P61009 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.81□□□□□ -1.64
SPCS3P61009 AC078899.1-201ENST00000521432 1185 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.81□□□□□ -1.64
SPCS3P61009 AL121594.2-201ENST00000541658 472 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.81□□□□□ -1.64
SPCS3P61009 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.81□□□□□ -1.64
SPCS3P61009 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.81□□□□□ -1.64
SPCS3P61009 AC090826.1-203ENST00000569235 490 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 AC025283.1-201ENST00000572039 734 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.81□□□□□ -1.64
SPCS3P61009 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC4.81□□□□□ -1.64
SPCS3P61009 MIR4732-201ENST00000581873 76 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.81□□□□□ -1.64
SPCS3P61009 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.81□□□□□ -1.64
SPCS3P61009 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.81□□□□□ -1.64
SPCS3P61009 AL390877.1-201ENST00000605704 214 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 AL008729.2-201ENST00000606393 473 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 AL133481.2-203ENST00000607558 139 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 MIR6736-201ENST00000616799 59 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 MIR6829-201ENST00000620375 67 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.81□□□□□ -1.64
SPCS3P61009 AC079776.5-201ENST00000641920 211 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.81□□□□□ -1.64
SPCS3P61009 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 Z95327.2-201ENST00000414579 1873 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 AC120338.1-201ENST00000625074 1541 ntBASIC4.81□□□□□ -1.64
SPCS3P61009 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.81□□□□□ -1.64
SPCS3P61009 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPCS3P61009 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.81□□□□□ -1.64
SPCS3P61009 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SPCS3P61009 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 AL606537.1-201ENST00000607258 2011 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 AC025574.1-201ENST00000554784 1653 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.8□□□□□ -1.64
SPCS3P61009 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SPCS3P61009 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms