Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC245517.2-201ENST00000442890 346 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 GAPDHP23-201ENST00000444823 993 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 AL627224.1-201ENST00000448334 444 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 AL121578.2-201ENST00000448797 447 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 AC009244.1-201ENST00000450566 258 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 TREML3P-201ENST00000457327 501 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 LARP7P4-201ENST00000481075 878 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 CCDC11P1-201ENST00000503137 1162 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC093770.1-201ENST00000511559 571 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC022826.1-201ENST00000519383 805 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 AP003049.1-201ENST00000529418 457 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC089984.3-201ENST00000552838 363 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 AC005519.1-201ENST00000554490 601 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 MIR378H-201ENST00000579966 83 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 RNU4ATAC-201ENST00000580972 127 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.95□□□□□ -1.62
NKX2-1P43699 OR7E19P-202ENST00000589942 844 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-1P43699 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 AC012175.1-201ENST00000603755 531 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 LSM1P2-201ENST00000604911 322 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 AL356608.1-201ENST00000610034 820 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 AL137000.1-201ENST00000610528 1244 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC006249.1-201ENST00000621223 471 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-1P43699 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-1P43699 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
NKX2-1P43699 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC016745.2-201ENST00000608834 3443 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-1P43699 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-1P43699 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-1P43699 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 KARSP1-201ENST00000451871 1752 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC009220.2-201ENST00000489759 1751 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-1P43699 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NKX2-1P43699 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NKX2-1P43699 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
NKX2-1P43699 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NKX2-1P43699 RN7SKP191-201ENST00000364713 306 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-1P43699 AC019178.1-201ENST00000392337 440 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-1P43699 RNA5SP231-201ENST00000410496 138 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC245096.1-201ENST00000413104 546 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-1P43699 AC002127.1-201ENST00000421305 225 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC073464.3-201ENST00000422564 712 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AL589794.1-201ENST00000424971 390 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-1P43699 AC092646.1-201ENST00000427142 901 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 VN1R53P-201ENST00000429536 957 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 RPS26P4-201ENST00000431743 355 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-1P43699 Z84478.1-201ENST00000438230 1219 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-1P43699 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 SLAMF6P1-201ENST00000451067 602 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC022080.2-201ENST00000452932 533 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 RSU1P1-201ENST00000453416 441 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 RN7SKP198-201ENST00000459286 306 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 RN7SL643P-201ENST00000471845 291 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 RN7SL326P-201ENST00000477493 296 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.94□□□□□ -1.62
NKX2-1P43699 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-1P43699 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.94□□□□□ -1.62
NKX2-1P43699 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms