Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.58□□□□□ -1.36
COL6A2P12110 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.58□□□□□ -1.36
COL6A2P12110 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.58□□□□□ -1.36
COL6A2P12110 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 RNU4-51P-201ENST00000364206 140 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 RNA5SP442-201ENST00000365050 107 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 RPL7P58-201ENST00000402913 758 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 RN7SKP268-201ENST00000411107 316 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC021876.1-201ENST00000425959 359 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC6.58□□□□□ -1.36
COL6A2P12110 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 MTND1P20-201ENST00000430341 950 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.58□□□□□ -1.36
COL6A2P12110 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.58□□□□□ -1.36
COL6A2P12110 LDHAP2-201ENST00000437325 985 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 CR391992.1-201ENST00000438601 394 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 H3F3BP1-201ENST00000440551 403 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC6.58□□□□□ -1.36
COL6A2P12110 SEPT14P24-201ENST00000447236 180 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.58□□□□□ -1.36
COL6A2P12110 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.58□□□□□ -1.36
COL6A2P12110 RN7SL149P-201ENST00000465197 281 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC004815.1-201ENST00000484185 331 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 PPP1R11P1-201ENST00000486095 376 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.58□□□□□ -1.36
COL6A2P12110 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC118282.2-201ENST00000508739 374 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 OR5BM1P-201ENST00000512021 366 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC6.58□□□□□ -1.36
COL6A2P12110 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC104417.1-201ENST00000523974 751 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AC084337.1-201ENST00000524809 686 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AP001646.2-201ENST00000528645 1156 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC140063.1-201ENST00000541343 259 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.58□□□□□ -1.36
COL6A2P12110 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 AC091304.4-201ENST00000565703 620 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.58□□□□□ -1.36
COL6A2P12110 RN7SL622P-201ENST00000585292 275 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AL031429.2-201ENST00000602605 649 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AP002906.1-201ENST00000603405 233 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AL121782.1-201ENST00000611242 413 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AC140479.4-205ENST00000636339 820 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AL357140.4-201ENST00000636827 412 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 ZNF101P1-201ENST00000435701 1720 ntBASIC6.58□□□□□ -1.36
COL6A2P12110 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.58□□□□□ -1.36
COL6A2P12110 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.58□□□□□ -1.36
COL6A2P12110 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.58□□□□□ -1.36
COL6A2P12110 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
COL6A2P12110 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL6A2P12110 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 AL022323.4-201ENST00000623980 13120 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 MTND4P5-201ENST00000435821 1374 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COL6A2P12110 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
COL6A2P12110 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.57□□□□□ -1.36
COL6A2P12110 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.57□□□□□ -1.36
COL6A2P12110 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL6A2P12110 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 RNU6-31P-201ENST00000384388 108 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL6A2P12110 RNU6-932P-201ENST00000391108 106 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC007068.1-201ENST00000396690 844 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.57□□□□□ -1.36
COL6A2P12110 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms