Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 RNA5SP346-201ENST00000363541 121 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AL356968.2-201ENST00000412769 1257 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 VN1R3-201ENST00000418822 919 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 TRGV7-201ENST00000427089 353 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AL592114.2-201ENST00000440142 532 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC092106.1-201ENST00000444291 373 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 GAPDHP62-201ENST00000515313 990 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AL671862.1-201ENST00000515851 349 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC096661.1-201ENST00000515870 822 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 RNA5SP230-201ENST00000517039 122 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC089984.3-201ENST00000552838 363 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC126615.2-201ENST00000553003 515 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 MIR3187-201ENST00000583431 70 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC087821.1-201ENST00000623639 567 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC006453.3-201ENST00000635891 377 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 RBMY1HP-201ENST00000382759 1389 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 RNA5SP485-201ENST00000365053 119 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AL096829.1-201ENST00000413677 457 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 DHFRP2-201ENST00000414224 547 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC079809.1-201ENST00000415468 276 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC002127.1-201ENST00000421305 225 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AL136231.1-201ENST00000429407 730 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 NPM1P23-201ENST00000440193 849 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AL512593.1-201ENST00000444758 779 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 MEMO1P4-201ENST00000453590 386 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AL133351.3-201ENST00000454998 193 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 RBMY2EP-202ENST00000456360 940 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 RN7SL372P-201ENST00000461982 298 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 GM2AP2-201ENST00000491764 562 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 RN7SL591P-201ENST00000496150 292 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AP001960.1-201ENST00000506494 658 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 MIR2117-201ENST00000516780 80 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 IGKV1D-32-201ENST00000517449 318 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AF186192.2-204ENST00000581667 524 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms