Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 AL590410.1-201ENST00000617925 333 ntBASIC5.3□□□□□ -1.56
RFT1Q96AA3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFT1Q96AA3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFT1Q96AA3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFT1Q96AA3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
RFT1Q96AA3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC022306.1-201ENST00000560489 1562 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AF287957.1-201ENST00000607368 1595 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC144833.1-201ENST00000567953 4089 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFT1Q96AA3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFT1Q96AA3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFT1Q96AA3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFT1Q96AA3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFT1Q96AA3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFT1Q96AA3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC245100.2-201ENST00000454544 1679 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFT1Q96AA3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFT1Q96AA3 RNA5SP375-201ENST00000362975 119 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 RNA5SP485-201ENST00000365053 119 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AL353625.1-202ENST00000366273 571 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 YWHAZP4-201ENST00000392459 708 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 RAB5CP1-201ENST00000395972 580 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 ARSFP1-201ENST00000398758 477 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 SNORA77.2-201ENST00000408571 112 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 RN7SKP121-201ENST00000410842 305 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC112492.2-201ENST00000432774 1030 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 NPM1P18-201ENST00000434232 732 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 PSMD8P1-201ENST00000436275 769 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 GAPDHP23-201ENST00000444823 993 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AL133351.3-201ENST00000454998 193 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 GLUD1P3-202ENST00000508551 200 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC008055.1-201ENST00000547032 609 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AL121839.1-201ENST00000556233 1185 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC027216.1-201ENST00000577726 685 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 DYNLL1P1-201ENST00000595442 269 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AL589765.6-201ENST00000601909 549 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AL133406.3-201ENST00000606817 541 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC100814.1-201ENST00000606963 623 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 OR8G7P-201ENST00000616658 848 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC096708.4-201ENST00000620563 552 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC005618.4-201ENST00000625053 554 ntBASIC5.29□□□□□ -1.56
RFT1Q96AA3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.29□□□□□ -1.56
RFT1Q96AA3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFT1Q96AA3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFT1Q96AA3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFT1Q96AA3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFT1Q96AA3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RFT1Q96AA3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFT1Q96AA3 HSPD1P7-201ENST00000447985 1686 ntBASIC5.28□□□□□ -1.56
RFT1Q96AA3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFT1Q96AA3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFT1Q96AA3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RFT1Q96AA3 OR56A4-201ENST00000330728 1209 ntBASIC5.28□□□□□ -1.56
RFT1Q96AA3 RPL11P4-201ENST00000332269 436 ntBASIC5.28□□□□□ -1.56
RFT1Q96AA3 RN7SKP257-201ENST00000364525 309 ntBASIC5.28□□□□□ -1.56
RFT1Q96AA3 RN7SKP69-201ENST00000365390 305 ntBASIC5.28□□□□□ -1.56
RFT1Q96AA3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RFT1Q96AA3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.28□□□□□ -1.56
RFT1Q96AA3 AL607077.1-201ENST00000401718 499 ntBASIC5.28□□□□□ -1.56
RFT1Q96AA3 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFT1Q96AA3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.28□□□□□ -1.56
RFT1Q96AA3 OR6R1P-201ENST00000431838 940 ntBASIC5.28□□□□□ -1.56
RFT1Q96AA3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.28□□□□□ -1.56
RFT1Q96AA3 SNRPFP2-201ENST00000440710 251 ntBASIC5.28□□□□□ -1.56
RFT1Q96AA3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.28□□□□□ -1.56
RFT1Q96AA3 AC092601.1-201ENST00000444526 383 ntBASIC5.28□□□□□ -1.56
RFT1Q96AA3 RSU1P1-201ENST00000453416 441 ntBASIC5.28□□□□□ -1.56
RFT1Q96AA3 RPL31P53-201ENST00000457065 348 ntBASIC5.28□□□□□ -1.56
RFT1Q96AA3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.28□□□□□ -1.56
RFT1Q96AA3 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RFT1Q96AA3 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms