Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 MIR2117-201ENST00000516780 80 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC078899.1-201ENST00000521432 1185 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC025857.1-201ENST00000525252 377 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC090424.1-201ENST00000535243 736 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC023158.1-201ENST00000561632 1025 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC007346.2-201ENST00000564816 892 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC002519.2-203ENST00000567043 837 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 MIR4502-201ENST00000580432 81 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC098483.2-201ENST00000603158 454 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 MIR6809-201ENST00000612189 116 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC108359.1-201ENST00000616451 1211 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AL627171.1-201ENST00000618845 1308 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 AC007998.4-201ENST00000612496 2533 ntBASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ZNF549Q6P9A3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC092070.2-203ENST00000598377 3644 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 HSPD1P9-201ENST00000420325 1636 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 KYNUP3-201ENST00000574386 1341 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 SELENOWP1-201ENST00000322792 252 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 RNU4-23P-201ENST00000362839 140 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 MIR1275-201ENST00000408770 80 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AL354890.1-201ENST00000413730 346 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 RPS4XP5-201ENST00000419038 768 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AL590399.2-201ENST00000427536 309 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 GAPDHP75-201ENST00000433910 943 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 TIMM8BP2-201ENST00000445940 251 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC104339.1-201ENST00000465478 348 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC023245.1-201ENST00000468501 517 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AL117692.1-201ENST00000494283 713 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC119751.4-201ENST00000507498 357 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC010374.2-201ENST00000512933 535 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC009948.4-201ENST00000604692 675 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AL021918.2-201ENST00000613415 194 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC096708.4-201ENST00000620563 552 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC012254.3-201ENST00000591183 2117 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 AC092646.2-201ENST00000431242 2095 ntBASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZNF549Q6P9A3 MAPK10-261ENST00000641050 3109 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC004656.1-201ENST00000568479 4951 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms