Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC9.05□□□□□ -0.96
CLIP1P30622 RPS26P38-201ENST00000414476 348 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC9.05□□□□□ -0.96
CLIP1P30622 AC019185.1-201ENST00000442718 389 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 RANP1-206ENST00000455094 651 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 RPL35AP19-201ENST00000469425 329 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC9.05□□□□□ -0.96
CLIP1P30622 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC9.05□□□□□ -0.96
CLIP1P30622 MAL2-207ENST00000522828 603 ntTSL 3 BASIC9.05□□□□□ -0.96
CLIP1P30622 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC9.05□□□□□ -0.96
CLIP1P30622 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC9.05□□□□□ -0.96
CLIP1P30622 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC9.05□□□□□ -0.96
CLIP1P30622 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC9.05□□□□□ -0.96
CLIP1P30622 AL034408.1-201ENST00000637712 664 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
CLIP1P30622 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC9.05□□□□□ -0.96
CLIP1P30622 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
CLIP1P30622 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC9.05□□□□□ -0.96
CLIP1P30622 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
CLIP1P30622 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC9.05□□□□□ -0.96
CLIP1P30622 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
CLIP1P30622 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 OR6D1P-201ENST00000436165 939 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC9.05□□□□□ -0.96
CLIP1P30622 RPL12P39-201ENST00000455456 496 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 RPS23P2-201ENST00000463671 415 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 IGHVIII-76-1-201ENST00000523776 286 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC9.05□□□□□ -0.96
CLIP1P30622 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC9.05□□□□□ -0.96
CLIP1P30622 MIR4311-201ENST00000580794 100 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 AC008115.3-201ENST00000614874 549 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 AC025574.2-201ENST00000615621 514 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 AL118522.2-201ENST00000616045 615 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 AC016769.4-201ENST00000616893 535 ntBASIC9.05□□□□□ -0.96
CLIP1P30622 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC9.05□□□□□ -0.96
CLIP1P30622 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CLIP1P30622 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CLIP1P30622 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CLIP1P30622 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC9.04□□□□□ -0.96
CLIP1P30622 AFP-201ENST00000226359 1914 ntTSL 5 BASIC9.04□□□□□ -0.96
CLIP1P30622 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
CLIP1P30622 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
CLIP1P30622 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC9.04□□□□□ -0.96
CLIP1P30622 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CLIP1P30622 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CLIP1P30622 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
CLIP1P30622 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC9.04□□□□□ -0.96
CLIP1P30622 PTMAP6-201ENST00000439110 327 ntBASIC9.04□□□□□ -0.96
CLIP1P30622 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC9.04□□□□□ -0.96
CLIP1P30622 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CLIP1P30622 RN7SL583P-201ENST00000475692 287 ntBASIC9.04□□□□□ -0.96
CLIP1P30622 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC9.04□□□□□ -0.96
CLIP1P30622 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
CLIP1P30622 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC9.04□□□□□ -0.96
CLIP1P30622 MRPS21P7-201ENST00000566937 238 ntBASIC9.04□□□□□ -0.96
CLIP1P30622 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC9.04□□□□□ -0.96
CLIP1P30622 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC9.04□□□□□ -0.96
CLIP1P30622 AC090607.5-201ENST00000615692 224 ntBASIC9.04□□□□□ -0.96
CLIP1P30622 MIR8080-201ENST00000622224 89 ntBASIC9.04□□□□□ -0.96
CLIP1P30622 AC021766.1-201ENST00000624404 741 ntBASIC9.04□□□□□ -0.96
CLIP1P30622 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CLIP1P30622 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
CLIP1P30622 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
CLIP1P30622 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC9.03□□□□□ -0.96
CLIP1P30622 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
CLIP1P30622 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 CD86-204ENST00000469710 1604 ntTSL 2 BASIC9.03□□□□□ -0.96
CLIP1P30622 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 SPTLC1P2-201ENST00000407089 121 ntBASIC9.03□□□□□ -0.96
CLIP1P30622 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC9.03□□□□□ -0.96
CLIP1P30622 AC092651.1-201ENST00000426110 312 ntBASIC9.03□□□□□ -0.96
CLIP1P30622 NPM1P22-201ENST00000427761 952 ntBASIC9.03□□□□□ -0.96
CLIP1P30622 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC9.03□□□□□ -0.96
CLIP1P30622 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 AC100832.1-201ENST00000471945 383 ntBASIC9.03□□□□□ -0.96
CLIP1P30622 RPL32P9-201ENST00000487963 407 ntBASIC9.03□□□□□ -0.96
CLIP1P30622 RN7SL547P-201ENST00000490793 290 ntBASIC9.03□□□□□ -0.96
CLIP1P30622 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC9.03□□□□□ -0.96
CLIP1P30622 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC9.03□□□□□ -0.96
CLIP1P30622 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC9.03□□□□□ -0.96
CLIP1P30622 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC9.03□□□□□ -0.96
CLIP1P30622 FCF1-203ENST00000553615 954 ntTSL 3 BASIC9.03□□□□□ -0.96
CLIP1P30622 RBM22P12-201ENST00000567098 1255 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms