Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.46□□□□□ -1.54
MT-ND1P03886 GARSP1-201ENST00000570895 719 ntBASIC5.46□□□□□ -1.54
MT-ND1P03886 TXNP4-201ENST00000575018 310 ntBASIC5.46□□□□□ -1.54
MT-ND1P03886 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.46□□□□□ -1.54
MT-ND1P03886 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.46□□□□□ -1.54
MT-ND1P03886 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MT-ND1P03886 AC012676.3-201ENST00000614983 479 ntBASIC5.46□□□□□ -1.54
MT-ND1P03886 AL138693.1-201ENST00000622219 129 ntBASIC5.46□□□□□ -1.54
MT-ND1P03886 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.46□□□□□ -1.54
MT-ND1P03886 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.46□□□□□ -1.54
MT-ND1P03886 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
MT-ND1P03886 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
MT-ND1P03886 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MT-ND1P03886 AC011503.2-201ENST00000594230 1500 ntBASIC5.46□□□□□ -1.54
MT-ND1P03886 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.46□□□□□ -1.54
MT-ND1P03886 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MT-ND1P03886 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.46□□□□□ -1.54
MT-ND1P03886 AC092111.2-201ENST00000611627 1414 ntBASIC5.46□□□□□ -1.54
MT-ND1P03886 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
MT-ND1P03886 AC004158.1-201ENST00000564508 4319 ntBASIC5.46□□□□□ -1.54
MT-ND1P03886 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MT-ND1P03886 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
MT-ND1P03886 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
MT-ND1P03886 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.45□□□□□ -1.54
MT-ND1P03886 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MT-ND1P03886 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.45□□□□□ -1.54
MT-ND1P03886 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MT-ND1P03886 SNORA21-201ENST00000362423 132 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.45□□□□□ -1.54
MT-ND1P03886 SNORA5.1-201ENST00000384275 131 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 RPL11P3-201ENST00000395256 523 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.45□□□□□ -1.54
MT-ND1P03886 RN7SKP38-201ENST00000410782 309 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AL356968.2-201ENST00000412769 1257 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.45□□□□□ -1.54
MT-ND1P03886 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.45□□□□□ -1.54
MT-ND1P03886 VTI1BP4-201ENST00000427516 527 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 RPS27AP6-201ENST00000427962 448 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 OR6C71P-201ENST00000432580 913 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AC096775.1-201ENST00000437724 448 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 SEPT14P12-201ENST00000442280 560 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AL356121.1-201ENST00000442911 156 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.45□□□□□ -1.54
MT-ND1P03886 RPS7P3-201ENST00000443360 580 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AL359839.1-201ENST00000451975 1160 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AC002553.3-201ENST00000453002 341 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.45□□□□□ -1.54
MT-ND1P03886 OR7E22P-201ENST00000478335 1035 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AC008629.2-201ENST00000503783 483 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.45□□□□□ -1.54
MT-ND1P03886 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.45□□□□□ -1.54
MT-ND1P03886 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.45□□□□□ -1.54
MT-ND1P03886 NACAP5-201ENST00000509863 636 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 GAPDHP62-201ENST00000515313 990 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.45□□□□□ -1.54
MT-ND1P03886 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.45□□□□□ -1.54
MT-ND1P03886 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.45□□□□□ -1.54
MT-ND1P03886 NPIPB14P-203ENST00000532298 987 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.45□□□□□ -1.54
MT-ND1P03886 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.45□□□□□ -1.54
MT-ND1P03886 MT1CP-201ENST00000567054 174 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.45□□□□□ -1.54
MT-ND1P03886 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.45□□□□□ -1.54
MT-ND1P03886 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.45□□□□□ -1.54
MT-ND1P03886 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
MT-ND1P03886 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.45□□□□□ -1.54
MT-ND1P03886 HIRAP1-201ENST00000605318 787 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.45□□□□□ -1.54
MT-ND1P03886 AL645933.2-201ENST00000606743 1207 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.45□□□□□ -1.54
MT-ND1P03886 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.45□□□□□ -1.54
MT-ND1P03886 AC007786.3-201ENST00000615154 596 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 AC007603.3-201ENST00000636915 979 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
MT-ND1P03886 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MT-ND1P03886 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.45□□□□□ -1.54
MT-ND1P03886 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MT-ND1P03886 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
MT-ND1P03886 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
MT-ND1P03886 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.45□□□□□ -1.54
MT-ND1P03886 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
MT-ND1P03886 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.45□□□□□ -1.54
MT-ND1P03886 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.45□□□□□ -1.54
MT-ND1P03886 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
MT-ND1P03886 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MT-ND1P03886 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.45□□□□□ -1.54
MT-ND1P03886 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.45□□□□□ -1.54
MT-ND1P03886 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MT-ND1P03886 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MT-ND1P03886 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MT-ND1P03886 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.45□□□□□ -1.54
MT-ND1P03886 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.44□□□□□ -1.54
MT-ND1P03886 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms