Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.6□□□□□ -1.67
SSSCA1O60232 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SSSCA1O60232 AC026367.3-201ENST00000619032 590 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.6□□□□□ -1.67
SSSCA1O60232 AC138965.3-201ENST00000623875 498 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SSSCA1O60232 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SSSCA1O60232 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SSSCA1O60232 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.6□□□□□ -1.67
SSSCA1O60232 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.6□□□□□ -1.67
SSSCA1O60232 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SSSCA1O60232 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 AC092376.2-201ENST00000622621 4116 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
SSSCA1O60232 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.6□□□□□ -1.67
SSSCA1O60232 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSSCA1O60232 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSSCA1O60232 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
SSSCA1O60232 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSSCA1O60232 OR9K1P-202ENST00000641111 3217 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.59□□□□□ -1.67
SSSCA1O60232 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSSCA1O60232 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSSCA1O60232 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSSCA1O60232 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SSSCA1O60232 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.59□□□□□ -1.67
SSSCA1O60232 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSSCA1O60232 RBPJP7-201ENST00000442803 1447 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 RBPJP5-201ENST00000449433 1447 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 TREML3P-201ENST00000457327 501 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 NXT1P1-201ENST00000458481 316 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.59□□□□□ -1.67
SSSCA1O60232 RPS7P10-201ENST00000464254 603 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 ATP5LP5-201ENST00000483050 299 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC117500.1-201ENST00000497352 755 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 MORF4L2P1-201ENST00000503761 858 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC021193.1-201ENST00000511607 420 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 NPM1P21-201ENST00000513394 762 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC4.59□□□□□ -1.67
SSSCA1O60232 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.59□□□□□ -1.67
SSSCA1O60232 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSSCA1O60232 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.59□□□□□ -1.67
SSSCA1O60232 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.59□□□□□ -1.67
SSSCA1O60232 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSSCA1O60232 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC027796.1-201ENST00000575593 512 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 AC016839.1-201ENST00000578162 867 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 RN7SL290P-201ENST00000578661 300 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC024267.2-201ENST00000582737 417 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.59□□□□□ -1.67
SSSCA1O60232 FAM72A-208ENST00000607379 1139 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC008833.1-201ENST00000611633 691 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 AL034549.2-201ENST00000618285 3373 ntBASIC4.59□□□□□ -1.67
SSSCA1O60232 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.59□□□□□ -1.67
SSSCA1O60232 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
SSSCA1O60232 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
SSSCA1O60232 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
SSSCA1O60232 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SSSCA1O60232 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SSSCA1O60232 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SSSCA1O60232 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SSSCA1O60232 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSSCA1O60232 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.58□□□□□ -1.68
SSSCA1O60232 AC144833.1-201ENST00000567953 4089 ntBASIC4.58□□□□□ -1.68
SSSCA1O60232 AL138820.1-201ENST00000617901 5305 ntBASIC4.58□□□□□ -1.68
SSSCA1O60232 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSSCA1O60232 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSSCA1O60232 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.58□□□□□ -1.68
SSSCA1O60232 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.58□□□□□ -1.68
SSSCA1O60232 AC125336.1-201ENST00000508893 2827 ntBASIC4.58□□□□□ -1.68
SSSCA1O60232 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SSSCA1O60232 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSSCA1O60232 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSSCA1O60232 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms