Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC005632.2-201ENST00000564271 828 ntBASIC5.54□□□□□ -1.52
SSX4O60224 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX4O60224 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX4O60224 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX4O60224 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX4O60224 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX4O60224 AC004805.3-201ENST00000603178 310 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC073111.2-201ENST00000605657 1075 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC026367.3-201ENST00000619032 590 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC022400.9-201ENST00000623633 273 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC073592.7-201ENST00000623659 507 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC091948.2-201ENST00000636510 279 ntBASIC5.54□□□□□ -1.52
SSX4O60224 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SSX4O60224 AC087565.3-202ENST00000642085 1603 ntBASIC5.54□□□□□ -1.52
SSX4O60224 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSX4O60224 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
SSX4O60224 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSX4O60224 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SSX4O60224 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SSX4O60224 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX4O60224 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SSX4O60224 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX4O60224 AC092692.1-201ENST00000623625 2595 ntBASIC5.53□□□□□ -1.52
SSX4O60224 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX4O60224 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX4O60224 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SSX4O60224 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
SSX4O60224 RN7SKP15-201ENST00000364742 309 ntBASIC5.53□□□□□ -1.52
SSX4O60224 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX4O60224 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.53□□□□□ -1.52
SSX4O60224 AL096800.1-201ENST00000405326 893 ntBASIC5.53□□□□□ -1.52
SSX4O60224 USP9YP19-201ENST00000412165 485 ntBASIC5.53□□□□□ -1.52
SSX4O60224 AC009506.2-201ENST00000420635 840 ntBASIC5.53□□□□□ -1.52
SSX4O60224 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.53□□□□□ -1.52
SSX4O60224 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX4O60224 AMYP1-201ENST00000440059 1023 ntBASIC5.53□□□□□ -1.52
SSX4O60224 GTF2IP14-201ENST00000441415 586 ntBASIC5.53□□□□□ -1.52
SSX4O60224 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.53□□□□□ -1.52
SSX4O60224 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX4O60224 VN1R38P-201ENST00000450265 887 ntBASIC5.53□□□□□ -1.52
SSX4O60224 HMGB1P7-201ENST00000450921 612 ntBASIC5.53□□□□□ -1.52
SSX4O60224 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.53□□□□□ -1.52
SSX4O60224 AC018645.1-201ENST00000505003 109 ntBASIC5.53□□□□□ -1.52
SSX4O60224 NPM1P21-201ENST00000513394 762 ntBASIC5.53□□□□□ -1.52
SSX4O60224 RNA5SP418-201ENST00000515951 117 ntBASIC5.53□□□□□ -1.52
SSX4O60224 SEC11B-201ENST00000518383 499 ntBASIC5.53□□□□□ -1.52
SSX4O60224 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.53□□□□□ -1.52
SSX4O60224 AC026688.1-201ENST00000520639 1168 ntBASIC5.53□□□□□ -1.52
SSX4O60224 AC008429.4-201ENST00000521201 182 ntBASIC5.53□□□□□ -1.52
SSX4O60224 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.53□□□□□ -1.52
SSX4O60224 OR7E10P-201ENST00000526420 991 ntBASIC5.53□□□□□ -1.52
SSX4O60224 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.53□□□□□ -1.52
SSX4O60224 AC012414.2-201ENST00000559474 187 ntBASIC5.53□□□□□ -1.52
SSX4O60224 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 AC016839.1-201ENST00000578162 867 ntBASIC5.53□□□□□ -1.52
SSX4O60224 MIR3189-201ENST00000578735 73 ntBASIC5.53□□□□□ -1.52
SSX4O60224 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX4O60224 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.53□□□□□ -1.52
SSX4O60224 MIR6085-201ENST00000618314 110 ntBASIC5.53□□□□□ -1.52
SSX4O60224 MIR6811-201ENST00000620409 58 ntBASIC5.53□□□□□ -1.52
SSX4O60224 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX4O60224 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 QRSL1P1-201ENST00000400977 1540 ntBASIC5.53□□□□□ -1.52
SSX4O60224 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SSX4O60224 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 MIR133A2-201ENST00000347538 102 ntBASIC5.52□□□□□ -1.53
SSX4O60224 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX4O60224 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SSX4O60224 AL589655.1-201ENST00000405398 482 ntBASIC5.52□□□□□ -1.53
SSX4O60224 TRIM60P17-201ENST00000415181 719 ntBASIC5.52□□□□□ -1.53
SSX4O60224 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX4O60224 REREP1Y-201ENST00000422655 198 ntBASIC5.52□□□□□ -1.53
SSX4O60224 AC092865.3-201ENST00000425390 1026 ntBASIC5.52□□□□□ -1.53
SSX4O60224 AC016027.5-201ENST00000427227 210 ntBASIC5.52□□□□□ -1.53
SSX4O60224 MTATP6P11-201ENST00000428071 670 ntBASIC5.52□□□□□ -1.53
SSX4O60224 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 REREP2Y-201ENST00000439103 200 ntBASIC5.52□□□□□ -1.53
SSX4O60224 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms