Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DMAP28067 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC009220.2-201ENST00000489759 1751 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC093909.5-201ENST00000621839 1799 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DMAP28067 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC092681.1-201ENST00000297369 291 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC010894.1-201ENST00000313760 361 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 RNU105B-201ENST00000364478 208 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 RNA5SP91-201ENST00000390902 119 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC003045.1-201ENST00000398779 713 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC096921.1-201ENST00000411661 375 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 SETP15-201ENST00000412724 337 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 PSMD8P1-201ENST00000436275 769 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 LINC02210-201ENST00000444561 288 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 COX4I1P2-201ENST00000447446 547 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 HIGD1AP16-201ENST00000450986 258 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 RN7SL372P-201ENST00000461982 298 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 KHDC1P1-201ENST00000511053 508 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 RNA5SP206-201ENST00000516703 121 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC008126.1-201ENST00000549019 480 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 OR4C49P-201ENST00000563891 900 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 DPRXP4-201ENST00000578053 568 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 NANOGP3-201ENST00000605855 286 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 MIR6731-201ENST00000614863 72 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 OR8G7P-201ENST00000616658 848 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC103564.3-201ENST00000621194 220 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC027506.1-201ENST00000621395 198 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC015660.5-201ENST00000623238 564 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 FANCD2P2-201ENST00000437591 1400 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC104623.2-202ENST00000623477 4002 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 AC006206.1-201ENST00000544842 3387 ntBASIC5.02□□□□□ -1.61
HLA-DMAP28067 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DMAP28067 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
HLA-DMAP28067 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DMAP28067 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DMAP28067 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DMAP28067 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DMAP28067 EIF3EP1-201ENST00000433978 1316 ntBASIC5.01□□□□□ -1.61
HLA-DMAP28067 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DMAP28067 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DMAP28067 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DMAP28067 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DMAP28067 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DMAP28067 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DMAP28067 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DMAP28067 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DMAP28067 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DMAP28067 AL139100.1-201ENST00000408001 498 ntBASIC5.01□□□□□ -1.61
HLA-DMAP28067 RN7SKP97-201ENST00000410966 333 ntBASIC5.01□□□□□ -1.61
HLA-DMAP28067 RNA5SP155-201ENST00000411154 129 ntBASIC5.01□□□□□ -1.61
HLA-DMAP28067 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DMAP28067 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HLA-DMAP28067 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DMAP28067 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DMAP28067 POU5F1P5-201ENST00000445059 658 ntBASIC5.01□□□□□ -1.61
HLA-DMAP28067 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DMAP28067 AC105391.1-201ENST00000503155 1045 ntBASIC5.01□□□□□ -1.61
HLA-DMAP28067 AC112184.1-201ENST00000505179 312 ntBASIC5.01□□□□□ -1.61
HLA-DMAP28067 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms