Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.8□□□□□ -1.32
HDAC6Q9UBN7 AC024587.1-201ENST00000505925 2157 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AL022323.4-201ENST00000623980 13120 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 HMGA1P8-201ENST00000414130 321 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 RPS26P38-201ENST00000414476 348 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 UBE2V1P14-201ENST00000415815 558 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AL445466.1-201ENST00000448432 357 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AL133372.1-201ENST00000493565 745 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 RN7SL284P-201ENST00000498823 275 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 SETP21-201ENST00000514799 892 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AL357562.1-201ENST00000624911 609 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AP000550.3-201ENST00000637734 379 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 AC092724.1-201ENST00000624623 3397 ntBASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HDAC6Q9UBN7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 RNU1-59P-201ENST00000364829 162 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 MIR433-201ENST00000384837 93 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 AC245060.4-201ENST00000413293 1121 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 AC245884.2-201ENST00000426257 404 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 RN7SL717P-201ENST00000478343 297 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 WBP1LP3-201ENST00000523033 208 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 ZNF322P1-201ENST00000568013 1209 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 AL021368.3-201ENST00000607119 578 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 FAM72A-208ENST00000607379 1139 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 AL138960.1-201ENST00000613838 513 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 U1.25-201ENST00000614085 162 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 U1.34-201ENST00000618578 162 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 U1.31-201ENST00000620022 160 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms